1. Gowinda
Gowinda: unbiased analysis of gene set enrichment for Genome Wide Association Studies
标签:Genomics, Genome Wide Association Studies,Population genetics,Population Genomics, High-throughput sequencing
2. CNB MetaGenomics tools
A number of tools and meta-tools developed at CNB/CSIC for the analysis of metagenomics data (some rely on QIIME).
标签:Metagenomics, Biodiversity,Community analysis, High-throughput sequencing
3. DiscoSnp
discoSnps : qualitative de-novo SNP caller. Extremely low memory and time efficient. No reference genome needed. Call both homozygous and heterozygous SNPs.
标签:Population Genomics,Comparative genomics,Barcoding, DNA-Seq, De novo assembly, Genotyping, High-throughput sequencing